Raw (non-binary) Track Files

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CASE.fwd.wig.gz (Summary mean-normalized coverage wiggle file, generated by QoRTs. Cases, fwd strand.)
CASE.rev.wig.gz (Summary mean-normalized coverage wiggle file, generated by QoRTs. Cases, rev strand.)
CTRL.fwd.wig.gz (Summary mean-normalized coverage wiggle file, generated by QoRTs. Ctrls, fwd strand.)
CTRL.rev.wig.gz (Summary mean-normalized coverage wiggle file, generated by QoRTs. Ctrls, rev strand.)
CASE.vs.CTRL.bed.gz (Simple Splice junction mean-normalized coverage plot, generated by QoRTs. Compares cases and controls.)
CASE.vs.CTRL.orphan.bed.gz (Simple "orphan/ambiguous" Splice junction mean-normalized coverage plot, generated by QoRTs. Compares cases and controls.)
JS.allGenes.exonCoverage.bed.gz (Junctionseq exon coverage plots)
JS.allGenes.junctionCoverage.bed.gz (Junctionseq splice junction coverage plots. Note that this is similar to CASE.vs.CTRL.bb except that it uses GLM parameter estimates rather than a simple normalized average.)
JS.sigGenes.pvalues.bed.gz (JunctionSeq signiticant exons and junctions, with adjusted p-values)
SAMP1.bed.gz (Single-sample splice junction counts, generated by QoRTs)
SAMP1.fwd.wig.gz (Single-sample wiggle coverage counts for SAMP1, generated by QoRTs. Fwd strand.)
SAMP1.rev.wig.gz (Single-sample wiggle coverage counts for SAMP1, generated by QoRTs. Fwd strand.)