1
Introduction to DNA Nexus and Cloud Computing for Bioinformatics
1.1
Hi!
1.2
Target Audience:
1.3
Audience Experience Level:
1.4
Audience Needs:
2
Why use the cloud?
2.1
Why use the cloud?
2.2
Why use the cloud?
3
Which Cloud to Use?
3.1
Which Cloud to Use?
3.2
Which Cloud to Use?
4
DNA Nexus
5
Getting Started
5.1
Getting Started
5.2
Getting Started
5.3
Getting Started
5.4
Getting Started
5.5
Getting Started
5.6
Getting Started
6
Command Line vs GUI
6.1
The Web Interface
6.2
The Web Interface
6.3
The Web Interface
6.4
The Web Interface
7
The Command Line tool: dx
7.1
Using the Command Line Tool
7.2
Using the Command Line Tool
7.3
Using the Command Line Tool
7.4
Using the Command Line Tool
7.5
Using the Command Line Tool
8
DNA Nexus Apps
8.1
Running Apps
8.2
Running Apps
8.3
Running Apps
8.4
Running Apps
9
DNA Nexus Workstations and Scripts
9.1
DNA Nexus Workstations and Scripts
9.2
R Bioinformatics Toolkit
9.3
R Bioinformatics Toolkit
10
App Monitoring
10.1
App Monitoring
10.2
App Monitoring
10.3
App Monitoring
11
Questions?
12
Advanced: Creating a New App
12.1
The App Builder Wizard:
12.2
Modifying the App:
12.3
Building the App:
12.4
Uploading Input Files
12.5
Running the software
12.6
Downloading results
12.7
More useful commands:
13
Legal
References
Introduction to DNA Nexus and Cloud Computing for Bioinformatics
6.3
The Web Interface
Similarly, files can be downloaded from DNA Nexus, although for large files you will incur fees.
